Basic Information
Locus ID:
Dusal.0006s00020.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold6 | 381135 | 393137 | - | Dusal.0006s00020.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 46,719.96 Da | 41.99 | 86.58 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17939 | DEADc_EIF4A | 44 | 241 | 1.1417E-130 | - |
| CDD | cd18787 | SF2_C_DEAD | 252 | 382 | 1.96131E-60 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 64 | 225 | 2.0E-38 | IPR011545 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 265 | 373 | 7.4E-29 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 107 | 393 | 1.14E-71 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 248 | 412 | 3.0E-58 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 28 | 247 | 6.9E-66 | IPR027417 |
| SMART | SM00490 | helicmild6 | 292 | 373 | 1.4E-31 | IPR001650 |
| SMART | SM00487 | ultradead3 | 58 | 255 | 4.5E-52 | IPR014001 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 70 | 240 | 27.101532 | IPR014001 |
| ProSiteProfiles | PS51195 | DEAD-box RNA helicase Q motif profile. | 39 | 67 | 11.33656 | IPR014014 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 251 | 412 | 26.238853 | IPR001650 |
| ProSitePatterns | PS00039 | DEAD-box subfamily ATP-dependent helicases signature. | 186 | 194 | - | IPR000629 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.1 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_001691452.2 | uncharacterized protein CHLRE_06g298650v5 [Chlamydomonas reinhardtii] | 0 |
| P41379 | Eukaryotic initiation factor 4A-2 OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0S1VVL8 | DEAD box RNA helicase CiRH4 (Fragment) OS=Chlamydomonas sp. ICE-L OX=309537 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology