Basic Information
Locus ID:
Dusal.0004s00045.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold4 | 811594 | 829241 | + | Dusal.0004s00045.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 39,650.10 Da | 59.70 | 72.91 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 299 | 349 | 1.3E-6 | IPR001841 |
| Pfam | PF17123 | RING-like zinc finger | 88 | 115 | 1.4E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 290 | 353 | 1.98E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 77 | 117 | 2.06E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 276 | 354 | 6.9E-10 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 129 | 1.0E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 300 | 348 | 1.5E-4 | IPR001841 |
| SMART | SM00184 | ring_2 | 89 | 138 | 0.19 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 89 | 115 | 8.948558 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 300 | 349 | 11.412309 | IPR001841 |
| Coils | Coil | Coil | 147 | 167 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042920960.1 | uncharacterized protein CHLRE_09g392650v5 [Chlamydomonas reinhardtii] | 0 |
| Q9H0A6 | RING finger protein 32 OS=Homo sapiens OX=9606 GN=RNF32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A250X828 | RING-type domain-containing protein OS=Chlamydomonas eustigma OX=1157962 GN=CEUSTIGMA_g6665.t1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl54304, Sgl59648 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0004s00045.v1.0 |