Basic Information
Locus ID:
Dusal.0003s00030.v1.0
Species & Taxonomic ID:
Dunaliella salina & 3046
Genome Assembly:
v1.0
Description:
Alpha-kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold3 | 576403 | 625311 | - | Dusal.0003s00030.v1.0 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.96 | 129,310.82 Da | 49.64 | 76.56 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 293 | 351 | 1.6E-5 | IPR000504 |
| Pfam | PF00076 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 209 | 269 | 5.7E-11 | IPR000504 |
| Pfam | PF02816 | Alpha-kinase family | 1014 | 1170 | 1.6E-19 | IPR004166 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 964 | 1179 | 8.67E-19 | IPR011009 |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 208 | 350 | 1.56E-24 | IPR035979 |
| Gene3D | G3DSA:3.20.200.10 | MHCK/EF2 kinase | 1084 | 1183 | 1.6E-20 | - |
| Gene3D | G3DSA:3.30.70.330 | - | 288 | 371 | 1.5E-8 | IPR012677 |
| Gene3D | G3DSA:3.30.70.330 | - | 195 | 283 | 6.7E-16 | IPR012677 |
| SMART | SM00360 | rrm1_1 | 208 | 276 | 3.3E-14 | IPR000504 |
| SMART | SM00360 | rrm1_1 | 290 | 363 | 0.016 | IPR000504 |
| SMART | SM00811 | alpha_kinase | 959 | 1170 | 1.7E-5 | IPR004166 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 207 | 280 | 14.50465 | IPR000504 |
| ProSiteProfiles | PS51158 | Alpha-type protein kinase domain profile. | 950 | 1178 | 16.620066 | IPR004166 |
| ProSiteProfiles | PS50102 | Eukaryotic RNA Recognition Motif (RRM) profile. | 289 | 367 | 10.854795 | IPR000504 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 444 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_050374721.1 | flowering time control protein FCA [Potentilla anserina] | 0 |
| A0JM51 | CUGBP Elav-like family member 5 OS=Xenopus tropicalis OX=8364 GN=celf5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1F9F9S3 | Peripla_BP_6 domain-containing protein OS=Deltaproteobacteria bacterium RBG_16_71_12 OX=1797848 GN=A2138_03635 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 24 | Dusal.0003s00030.v1.0, Dusal.0015s00021.v1.0 ... |