Basic Information
Locus ID:
Contig398.8
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig398 | 278357 | 279382 | + | Contig398.8 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 36,560.86 Da | 49.09 | 75.63 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 39 | 313 | 2.7E-53 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 328 | 3.24E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 329 | 1.1E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 30 | 129 | 9.4E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 313 | 38.774521 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66750.1 | CDK-activating kinase 4. | 1.01E-24 |
| RefSeq | XP_039806363.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 1.28E-147 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 4.43E-58 | |
| TrEMBL | A0A2T7F5C5 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G143900 PE=4 SV=1 | 1.55E-150 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology