Basic Information
Locus ID:
Contig2362.2
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig2362 | 11728 | 12750 | + | Contig2362.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 35,920.85 Da | 60.09 | 85.91 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 73 | 333 | 7.5E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 335 | 4.45E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 63 | 340 | 4.6E-55 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 333 | 37.332855 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73500.1 | MAP kinase kinase 9. member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3. | 1.14E-54 |
| RefSeq | XP_034594660.1 | mitogen-activated protein kinase kinase 9-like [Setaria viridis] | 8.15E-188 |
| Q9FX43 | Mitogen-activated protein kinase kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MKK9 PE=1 SV=1 | 1.11E-53 | |
| TrEMBL | A0A1E5V4G6 | Mitogen-activated protein kinase kinase 7 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0019047 PE=4 SV=1 | 3.08E-191 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH02.2284, AH03.1639, AH05.2134, BH02.2385, BH05.2266 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0023950, gene-QOZ80_1AG0023970 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0086640.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_021320, gene-QYE76_053724 |
| Poaceae | Oryza coarctata | 3 | Oco01G014270, Oco02G014510, Oco23G006700 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g42400.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_01G126000, gene-BS78_01G131600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0603293 |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G015780, Chr03G010710, Chr05G018050, Chr10G011800 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G641700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1BG066320 |
| Poaceae | Triticum aestivum | 5 | TraesCS1A02G391100.1.cds1, TraesCS1B02G419300.1.cds1 ... |
| Poaceae | Zea mays | 9 | Zm00001eb145170_P001, Zm00001eb145180_P001 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-19858, nbis-gene-29290, nbis-gene-31045 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g10106, Zma_g30189, Zma_g32539, Zma_g8188 |