Basic Information
Locus ID:
Contig192.148
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig192 | 1342643 | 1343663 | + | Contig192.148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.88 | 24,403.65 Da | 84.29 | 68.30 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06030.1 | NPK1-related protein kinase 3. NPK1-related protein kinase 3 | 4.08E-9 |
| RefSeq | XP_039854063.1 | mitogen-activated protein kinase kinase kinase NPK1-like isoform X3 [Panicum virgatum] | 1.44E-11 |
| O22042 | Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana OX=3702 GN=ANP3 PE=1 SV=1 | 4.05E-8 | |
| TrEMBL | A0A3L6RM51 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G12720 PE=4 SV=1 | 3.22E-10 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH04.771, Contig192.148 |
| Poaceae | Oryza coarctata | 1 | Oco02G011660 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G606800 |