Basic Information
Locus ID:
Contig192.136
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig192 | 1241824 | 1244294 | - | Contig192.136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 34,805.47 Da | 41.60 | 96.42 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 16 | 316 | 8.3E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 320 | 1.2E-80 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 315 | 1.9E-98 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 273 | 320 | 0.42 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 2 | 242 | 4.4E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 3 | 317 | 50.225887 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 2.25E-160 |
| RefSeq | XP_004985165.1 | homocysteine S-methyltransferase 1 [Setaria italica] | 4.61E-225 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 9.19E-218 | |
| TrEMBL | K4ACM5 | Hcy-binding domain-containing protein OS=Setaria italica OX=4555 GN=101761102 PE=4 SV=1 | 1.04E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology