Basic Information
Locus ID:
Contig192.128
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig192 | 1144604 | 1148809 | - | Contig192.128 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 80,336.48 Da | 42.45 | 91.74 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 383 | 646 | 1.10832E-85 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 65 | 4.1E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 380 | 639 | 3.8E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 641 | 1.52E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 212 | 6.43E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 232 | 3.9E-8 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 365 | 451 | 1.7E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 661 | 2.4E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 184 | 3.1E-40 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 651 | 29.559153 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 383 | 405 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 255 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 1.19E-164 |
| RefSeq | XP_039779240.1 | probable inactive receptor kinase At1g48480 [Panicum virgatum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 1.15E-163 | |
| TrEMBL | A0A8T0P0F1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG542400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology