Basic Information
Locus ID:
Contig181.200
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig181 | 1673259 | 1674227 | - | Contig181.200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 33,434.86 Da | 40.85 | 56.83 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 83 | 313 | 1.81516E-117 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 24 | 63 | 5.87006E-18 | - |
| Pfam | PF00187 | Chitin recognition protein | 25 | 62 | 1.1E-12 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 82 | 313 | 1.2E-133 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 79 | 319 | 4.5E-110 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 25 | 67 | 2.09E-11 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 165 | 222 | 1.1E-122 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 23 | 65 | 1.2E-16 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 82 | 314 | 1.1E-122 | - |
| SMART | SM00270 | ChitinBD_3 | 25 | 62 | 6.8E-16 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 320 | 5.6E-127 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 23 | 64 | 11.069811 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 226 | 236 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 35 | 54 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 100 | 122 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 33 | 41 | 5.5E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 41 | 48 | 5.5E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 48 | 55 | 5.5E-7 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 1.45E-163 |
| RefSeq | XP_021304461.1 | chitinase 1-like [Sorghum bicolor] | 7.51E-191 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 7.35E-183 | |
| TrEMBL | B8QVH2 | chitinase OS=Zea mays subsp. parviglumis OX=76912 GN=chiI PE=4 SV=1 | 3.64E-192 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology