Basic Information
Locus ID:
Contig181.197
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig181 | 1650470 | 1651453 | - | Contig181.197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 34,154.77 Da | 43.17 | 58.07 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 89 | 321 | 2.26205E-116 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 22 | 60 | 8.29423E-18 | - |
| Pfam | PF00182 | Chitinase class I | 88 | 321 | 1.3E-132 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 23 | 60 | 8.9E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 23 | 62 | 1.19E-10 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 85 | 327 | 1.46E-110 | IPR023346 |
| Gene3D | G3DSA:3.30.60.10 | - | 21 | 64 | 9.9E-16 | IPR036861 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 171 | 230 | 4.7E-123 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 93 | 327 | 4.7E-123 | - |
| SMART | SM00270 | ChitinBD_3 | 23 | 60 | 5.0E-16 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 327 | 7.4E-132 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 21 | 62 | 11.015115 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 106 | 128 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 234 | 244 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 33 | 52 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 39 | 46 | 3.1E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 46 | 53 | 3.1E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 31 | 39 | 3.1E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 3.52E-156 |
| RefSeq | XP_002488863.2 | chitinase 1, partial [Sorghum bicolor] | 3.99E-187 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 9.84E-187 | |
| TrEMBL | Q6JBN5 | chitinase OS=Zea mays subsp. parviglumis OX=76912 GN=chiI PE=4 SV=1 | 7.88E-188 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology