Basic Information
Locus ID:
Contig181.175
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig181 | 1494072 | 1499190 | - | Contig181.175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 78,877.37 Da | 42.33 | 83.46 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 427 | 695 | 2.13671E-90 | - |
| Pfam | PF13516 | Leucine Rich repeat | 135 | 150 | 0.74 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 423 | 692 | 1.7E-39 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 160 | 220 | 1.5E-12 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 85 | 4.9E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 74 | 257 | 3.06E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 692 | 4.71E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 386 | 498 | 1.0E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 270 | 5.2E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 718 | 9.8E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 110 | 136 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 7.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 159 | 182 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 229 | 48.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 161 | 183 | 7.265315 | IPR001611 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 8.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 695 | 35.73571 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 450 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 2.18E-225 |
| RefSeq | XP_025795857.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 2.1E-224 | |
| TrEMBL | A0A2T7CGY1 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G588500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology