Basic Information
Locus ID:
Contig181.14
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig181 | 132195 | 148402 | - | Contig181.14 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 88,225.98 Da | 31.23 | 86.14 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 221 | 312 | 7.0E-5 | IPR000210 |
| Pfam | PF00173 | Cytochrome b5-like Heme/Steroid binding domain | 34 | 96 | 3.0E-10 | IPR001199 |
| Pfam | PF03000 | NPH3 family | 405 | 653 | 6.2E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 218 | 311 | 4.08E-16 | IPR011333 |
| SUPERFAMILY | SSF55856 | Cytochrome b5-like heme/steroid binding domain | 27 | 129 | 1.57E-25 | IPR036400 |
| Gene3D | G3DSA:3.10.120.10 | - | 26 | 130 | 4.5E-31 | IPR036400 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 215 | 314 | 7.3E-12 | IPR011333 |
| SMART | SM01117 | Cyt_b5_2 | 33 | 129 | 2.4E-19 | IPR001199 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 224 | 291 | 9.206535 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 405 | 677 | 90.427635 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 733 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 804 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 4.69E-191 |
| RefSeq | XP_039829525.1 | BTB/POZ domain-containing protein NPY4-like [Panicum virgatum] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 4.52E-190 | |
| TrEMBL | A0A1D6JRQ6 | BTB/POZ domain-containing protein NPY2 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d028075 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology