Basic Information
Locus ID:
Contig1437.2
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1437 | 42476 | 46369 | - | Contig1437.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 59,304.72 Da | 53.43 | 72.74 | -0.42 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034568568.1 | uncharacterized protein LOC117833244 [Setaria viridis] | 6.86E-159 |
| TrEMBL | K3ZM68 | DUF295 domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G036000v2 PE=4 SV=1 | 2.2E-157 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH04.349, AH04.350, AH04.351, AH04.352, BH04.319, BH09.47 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_9AG0675010, gene-QOZ80_9AG0675020 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G094900, gene-BS78_K254200 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G021150 |
| Poaceae | Triticum aestivum | 1 | TraesCS7D02G214100.1.cds1 |