Basic Information
Locus ID:
Contig1337.5
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1337 | 52099 | 55556 | - | Contig1337.5 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 81,956.03 Da | 40.99 | 78.35 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 369 | 657 | 2.6E-40 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 87 | 283 | 2.8E-7 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 673 | 1.07E-68 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 87 | 275 | 2.7E-9 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 75 | 284 | 4.3E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 453 | 3.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 667 | 3.6E-50 | - |
| SMART | SM00220 | serkin_6 | 369 | 666 | 7.7E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 662 | 36.117329 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 507 | 519 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 406 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 9.23E-72 |
| RefSeq | XP_025827502.1 | probable L-type lectin-domain containing receptor kinase S.5 [Panicum hallii] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 8.99E-71 | |
| TrEMBL | A0A2S3ICK4 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_8G037000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 11 | AH02.577, AH03.569, BH02.583, BH03.679, BH09.49, CH01.303 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0407920, gene-QOZ80_5BG0456240 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0313620.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 9 | gene-QYE76_004315, gene-QYE76_053699, gene-QYE76_060580 ... |
| Poaceae | Oryza coarctata | 1 | Oco07G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os02g06160.1, LOC_Os04g01860.1 |
| Poaceae | Paspalum vaginatum | 5 | gene-BS78_05G055500, gene-BS78_06G012600, gene-BS78_K195600 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr25G016660 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G489100, Tel5E01G776200 |
| Poaceae | Triticum dicoccoides | 8 | gene_TRIDC3AG067650, gene_TRIDC3BG071900 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS3B02G334100.1, TraesCS3D02G299500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb092630_P001 |
| Poaceae | Zoysia japonica | 11 | nbis-gene-3291, nbis-gene-37499, nbis-gene-37500 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g19235, Zma_g19238, Zma_g20806, Zma_g3637 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000034l.10 |