Basic Information
Locus ID:
Contig1337.2
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1337 | 21448 | 22189 | + | Contig1337.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 25,971.01 Da | 39.88 | 92.08 | 0.19 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039779006.1 | uncharacterized protein LOC120646524 [Panicum virgatum] | 5.93E-65 |
| TrEMBL | A0A8T0PM49 | DUF295 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8KG058400 PE=4 SV=1 | 3.41E-63 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 15 | AH04.349, AH04.350, AH04.351, AH04.352, BH04.319, BH09.47 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_9AG0675010, gene-QOZ80_9AG0675020 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G094900, gene-BS78_K254200 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G021150 |
| Poaceae | Triticum aestivum | 1 | TraesCS7D02G214100.1.cds1 |