Basic Information
Locus ID:
Contig1116.2
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1116 | 123966 | 128812 | + | Contig1116.2 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 41,612.56 Da | 35.67 | 82.05 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 66 | 244 | 1.3E-31 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 313 | 2.19E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 264 | 4.9E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 138 | 3.0E-25 | - |
| SMART | SM00220 | serkin_6 | 65 | 311 | 9.9E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 361 | 25.248283 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 71 | 93 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 201 | 213 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21410.2 | - | 3.52E-39 |
| RefSeq | XP_024311005.1 | uncharacterized protein LOC100845829 isoform X1 [Brachypodium distachyon] | 3.82E-94 |
| Q8S9L6 | Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana OX=3702 GN=CRK29 PE=2 SV=1 | 1.37E-37 | |
| TrEMBL | A0A5J9UNH9 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27271 PE=4 SV=1 | 3.37E-98 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | Contig1116.2 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G463300, Tel3E01G846500 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1BG048450, gene_TRIDC5BG076680 |