Basic Information
Locus ID:
Contig1042.21
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig1042 | 126206 | 129395 | + | Contig1042.21 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 66,960.11 Da | 48.93 | 69.24 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 481 | 597 | 4.2E-10 | IPR001525 |
| SUPERFAMILY | SSF46934 | UBA-like | 59 | 98 | 9.64E-5 | IPR009060 |
| SUPERFAMILY | SSF46934 | UBA-like | 143 | 189 | 2.58E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 480 | 595 | 7.65E-19 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 285 | 477 | 1.05E-24 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 51 | 101 | 9.6E-8 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 283 | 378 | 3.4E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 442 | 602 | 4.0E-28 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 149 | 205 | 2.4E-5 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 480 | 603 | 21.389986 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 277 | 603 | 132.019577 | IPR030380 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 58 | 99 | 10.016698 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 158 | 202 | 10.305863 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 2.93E-178 |
| RefSeq | XP_004986027.1 | DNA (cytosine-5)-methyltransferase DRM2 [Setaria italica] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 3.67E-295 | |
| TrEMBL | K4A7C3 | SAM-dependent MTase DRM-type domain-containing protein OS=Setaria italica OX=4555 GN=101784586 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology