Basic Information
Locus ID:
Chr31G008510
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 31942715 | 31962653 | + | Chr31G008510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 452 | 698 | 1.46968E-130 | - |
| CDD | cd00130 | PAS | 87 | 188 | 1.06379E-8 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 447 | 698 | 2.3E-67 | IPR001245 |
| Pfam | PF13426 | PAS domain | 94 | 189 | 3.2E-11 | IPR000014 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 698 | 2.83E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 83 | 188 | 8.9E-18 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 88 | 194 | 2.4E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 524 | 729 | 5.1E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 439 | 523 | 2.5E-30 | - |
| SMART | SM00091 | pas_2 | 78 | 145 | 7.3E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 446 | 706 | 1.2E-61 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 87 | 188 | 2.7E-12 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 76 | 147 | 15.736787 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 446 | 711 | 44.032368 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 565 | 577 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 625 | 647 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 559 | 577 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 669 | 691 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 520 | 533 | 9.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 606 | 616 | 9.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 52 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_025827010.1 | probable serine/threonine-protein kinase DDB_G0267686 [Panicum hallii] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9IFW9 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology