HalophFGD

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Basic Information
Locus ID: Chr31G007750
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000031 30789479 30790832 + Chr31G007750
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 92 286 8.24E-15 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 36 328 8.9E-12 IPR032675
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039772959.1 MEIOTIC F-BOX protein MOF-like [Panicum virgatum] 0
Swiss-Prot Q9LV26 Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2 0
TrEMBL A0A5J9ULM6 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_26895 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 1 Sgl51268
Poaceae Echinochloa crus-galli 31 AH01.1527, AH03.669, AH03.670, AH04.1884, AH04.1885 ...
AH09.1070, AH09.1072, AH09.1074, BH03.797, BH03.798, BH04.1916, BH04.1917, BH04.1918, BH07.1796, BH09.1149, BH09.1150, BH09.1151, BH09.1153, BH09.1154, BH09.1155, BH09.1160, BH09.1161, CH03.890, CH03.891, CH04.2256, CH04.2258, CH09.1281, CH09.1282, CH09.1287, CH09.1288, CH09.1291
Poaceae Eleusine coracana subsp. coracana 16 gene-QOZ80_4AG0316660, gene-QOZ80_4AG0316670 ...
gene-QOZ80_4AG0316700, gene-QOZ80_4BG0347870, gene-QOZ80_4BG0347880, gene-QOZ80_4BG0347890, gene-QOZ80_4BG0347900, gene-QOZ80_4BG0347930, gene-QOZ80_4BG0347950, gene-QOZ80_4BG0347960, gene-QOZ80_4BG0347980, gene-QOZ80_5BG0448010, gene-QOZ80_9AG0688290, gene-QOZ80_9AG0688310, gene-QOZ80_9BG0716770, gene-QOZ80_9BG0716790
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.2HG0113350.1, HORVU.MOREX.r3.2HG0173930.1 ...
HORVU.MOREX.r3.3HG0324350.1, HORVU.MOREX.r3.3HG0329080.1, HORVU.MOREX.r3.4HG0398330.1, HORVU.MOREX.r3.5HG0515150.1.CDS1, HORVU.MOREX.r3.6HG0597680.1, HORVU.MOREX.r3.6HG0624800.1, HORVU.MOREX.r3.6HG0632670.1
Poaceae Lolium multiflorum 36 gene-QYE76_002125, gene-QYE76_020252, gene-QYE76_022723 ...
gene-QYE76_023887, gene-QYE76_026800, gene-QYE76_026837, gene-QYE76_027447, gene-QYE76_033845, gene-QYE76_037310, gene-QYE76_037658, gene-QYE76_041415, gene-QYE76_042114, gene-QYE76_044147, gene-QYE76_044148, gene-QYE76_044157, gene-QYE76_044162, gene-QYE76_044163, gene-QYE76_044165, gene-QYE76_044169, gene-QYE76_044410, gene-QYE76_049203, gene-QYE76_049852, gene-QYE76_049855, gene-QYE76_049903, gene-QYE76_050002, gene-QYE76_050338, gene-QYE76_050339, gene-QYE76_052080, gene-QYE76_053870, gene-QYE76_053871, gene-QYE76_053872, gene-QYE76_064570, gene-QYE76_065702, gene-QYE76_065784, gene-QYE76_068864, gene-QYE76_070044
Poaceae Oryza coarctata 11 Oco03G024970, Oco07G001490, Oco07G006480, Oco07G006490 ...
Oco07G006500, Oco07G007900, Oco07G007930, Oco08G001880, Oco08G006450, Oco08G007830, Oco08G007840
Poaceae Oryza sativa 12 LOC_Os04g12990.1, LOC_Os04g13010.1, LOC_Os04g13040.1 ...
LOC_Os04g35930.1, LOC_Os04g35940.1, LOC_Os04g35970.1, LOC_Os04g35990.1, LOC_Os04g36000.1, LOC_Os04g36010.1, LOC_Os04g36020.1, LOC_Os04g39070.1, LOC_Os04g39080.1
Poaceae Paspalum vaginatum 15 gene-BS78_02G107100, gene-BS78_05G186700, gene-BS78_K330000 ...
gene-BS78_05G199600, gene-BS78_05G199700, gene-BS78_05G199800, gene-BS78_05G199900, gene-BS78_05G200500, gene-BS78_05G200600, gene-BS78_05G232700, gene-BS78_06G104100, gene-BS78_06G104200, gene-BS78_06G104300, gene-BS78_06G104400, gene-BS78_06G104500
Poaceae Puccinellia tenuiflora 17 Pt_Chr0103073, Pt_Chr0103074, Pt_Chr0103075, Pt_Chr0103076 ...
Pt_Chr0104117, Pt_Chr0104119, Pt_Chr0104120, Pt_Chr0104121, Pt_Chr0106209, Pt_Chr0205341, Pt_Chr0303820, Pt_Chr0401094, Pt_Chr0603374, Pt_Chr0604531, Pt_Chr0604666, Pt_Chr0604788, Pt_Chr0702465
Poaceae Sporobolus alterniflorus 7 Chr01G024980, Chr07G015020, Chr23G012520, Chr26G001820 ...
Chr26G007020, Chr28G003530, Chr31G007750
Poaceae Thinopyrum elongatum 7 Tel4E01G435000, Tel5E01G653900, Tel5E01G886800 ...
Tel5E01G887200, Tel6E01G444600, Tel6E01G496200, Tel6E01G642500
Poaceae Triticum dicoccoides 18 gene_TRIDC2AG013410, gene_TRIDC2BG016320 ...
gene_TRIDC2BG047580, gene_TRIDC3AG074830, gene_TRIDC3BG082940, gene_TRIDC3BG086190, gene_TRIDC4AG006730, gene_TRIDC4AG047810, gene_TRIDC4BG044480, gene_TRIDC5AG060400, gene_TRIDC5BG083260, gene_TRIDC6AG035930, gene_TRIDC6AG054100, gene_TRIDC6AG054120, gene_TRIDC6BG023840, gene_TRIDC6BG042610, gene_TRIDC6BG063040, gene_TRIDC6BG063060
Poaceae Triticum aestivum 30 TraesCS1B02G030200.1, TraesCS2B02G325900.1 ...
TraesCS2B02G346600.1, TraesCS2D02G112100.1, TraesCS2D02G307200.1, TraesCS3A02G493200.1, TraesCS3A02G518400.1, TraesCS3A02G529000.1, TraesCS3B02G585800.1, TraesCS3B02G585900.1, TraesCS3B02G598000.1, TraesCS3D02G534300.1, TraesCS4A02G048500.1, TraesCS4A02G048600.1.cds1, TraesCS4A02G316100.1, TraesCS4A02G325200.2, TraesCS4B02G256300.1, TraesCS4D02G364300.1, TraesCS5A02G417200.1, TraesCS5B02G538000.1, TraesCS5D02G425300.1, TraesCS5D02G566400.1, TraesCS6B02G260300.1, TraesCS6B02G297100.1, TraesCS6B02G394600.1, TraesCS6D02G122700.1, TraesCS6D02G215800.1, TraesCS6D02G245100.1, TraesCS6D02G405500.1, TraesCS7A02G139700.1
Poaceae Zea mays 3 Zm00001eb082190_P001, Zm00001eb082200_P001 ...
Zm00001eb082210_P002
Poaceae Zoysia japonica 1 nbis-gene-43120
Poaceae Zoysia macrostachya 1 Zma_g18169
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-17868
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2945
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-17858
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.