halophFGD

Basic Information

Locus ID: Chr31G007700

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000031	30732931	30739850	+	Chr31G007700

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	127	177	4.8E-10	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	126	179	8.91E-11	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	127	177	7.8E-23	-
MobiDBLite	mobidb-lite	consensus disorder prediction	440	466	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K03097 (casein kinase II subunit alpha [EC:2.7.11.1])

Pathway:

ko03008 (Ribosome biogenesis in eukaryotes) map03008 (Ribosome biogenesis in eukaryotes) map04064 (NF-kappa B signaling pathway) ko04137 (Mitophagy - animal) map04137 (Mitophagy - animal) ko04139 (Mitophagy - yeast) map04139 (Mitophagy - yeast) ko04310 (Wnt signaling pathway) map04310 (Wnt signaling pathway) ko04520 (Adherens junction) map04520 (Adherens junction) ko04712 (Circadian rhythm - plant) map04712 (Circadian rhythm - plant)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23080.2	Protein kinase superfamily protein.
RefSeq	XP_020241888.1	casein kinase II subunit alpha-2-like [Asparagus officinalis]
Swiss-Prot	P28523	Casein kinase II subunit alpha OS=Zea mays OX=4577 GN=ACK2 PE=1 SV=1
TrEMBL	A0A7J8Z5H8	Protein kinase domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_019166 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for Chr31G007700.