Basic Information
Locus ID:
Chr31G006720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 29087411 | 29090540 | - | Chr31G006720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 440 | 686 | 3.6E-21 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 91 | 358 | 2.4E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 405 | 690 | 1.28E-33 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 69 | 359 | 2.83E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 708 | 7.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 371 | 1.3E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 496 | 1.2E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 161 | 2.3E-20 | - |
| SMART | SM00220 | serkin_6 | 86 | 361 | 6.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 688 | 17.545254 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 361 | 33.375336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 209 | 221 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 121 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034569657.1 | probable serine/threonine-protein kinase At1g01540 [Setaria viridis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6THS7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G163500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | CH04.1869, CH05.2817 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0325550.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco22G008390 |
| Poaceae | Oryza sativa | 8 | LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600798 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G153000, Tel7E01G297400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb114030_P001, Zm00001eb114060_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44241 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18068, Zma_g18069 |