Basic Information
Locus ID:
Chr31G005920
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 26706930 | 26708015 | - | Chr31G005920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 299 | 340 | 1.12609E-12 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 298 | 339 | 1.4E-6 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 290 | 346 | 1.66E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 280 | 348 | 5.2E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 299 | 339 | 0.0042 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 299 | 340 | 11.397556 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039824240.1 | uncharacterized protein LOC120686137 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9UMC2 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_27009 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology