Basic Information
Locus ID:
Chr31G004490
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 15605031 | 15609591 | - | Chr31G004490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 26 | 118 | 5.7E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 117 | 4.16E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 22 | 121 | 6.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 123 | 13.050642 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.3 | - | 0 |
| RefSeq | XP_047054709.1 | calcium-dependent protein kinase 3-like, partial [Lolium rigidum] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A804QPY8 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 1 | Chr31G004490 |
| Posidoniaceae | Posidonia oceanica | 4 | gene.Posoc01g24730, gene.Posoc02g01510, gene.Posoc04g22180 ... |