Basic Information
Locus ID:
Chr31G004400
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 14736960 | 14745564 | - | Chr31G004400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 584 | 856 | 4.1473E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 581 | 851 | 3.5E-50 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 442 | 8.84E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 558 | 853 | 6.34E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 538 | 654 | 1.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 655 | 873 | 1.6E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 322 | 445 | 6.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 316 | 8.1E-65 | IPR032675 |
| SMART | SM00220 | serkin_6 | 578 | 857 | 1.0E-45 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 386 | 409 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 83 | 105 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 410 | 432 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 180 | 204 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 0.015 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 578 | 857 | 41.064228 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 584 | 605 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 702 | 714 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 470 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_025827113.1 | receptor-like kinase TMK4 [Panicum hallii] | 0 |
| Q2R560 | Receptor protein kinase WSS1 OS=Oryza sativa subsp. japonica OX=39947 GN=WSS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9UQG0 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH04.1153, CH04.1339 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4BG0351990, gene-QOZ80_9AG0681760 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0374020.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_067050 |
| Poaceae | Oryza coarctata | 2 | Oco21G005150, Oco22G006180 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g41430.1, LOC_Os11g26130.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G135600 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr05G021660, Chr07G018000, Chr31G004400 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G266400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG023700, gene_TRIDC4BG025710 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G147700.1, TraesCS4B02G165600.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb112700_P001, Zm00001eb169350_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-38701 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18762 |