Basic Information
Locus ID:
Chr31G002770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 4994574 | 5000483 | - | Chr31G002770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07840 | STKc_CDK9_like | 181 | 465 | 1.81948E-142 | - |
| Pfam | PF00069 | Protein kinase domain | 181 | 465 | 1.5E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 175 | 470 | 3.51E-89 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 269 | 505 | 3.9E-69 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 175 | 268 | 7.1E-26 | - |
| SMART | SM00220 | serkin_6 | 181 | 465 | 6.4E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 181 | 465 | 44.371586 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 187 | 210 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 301 | 313 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 115 | - | - |
| Coils | Coil | Coil | 627 | 647 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10010.2 | - | 0 |
| RefSeq | XP_012704076.1 | probable serine/threonine-protein kinase At1g54610 [Setaria italica] | 0 |
| F4I114 | Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9UQF9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_28507 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Sporobolus alterniflorus | 3 | Chr0G015940, Chr0G027670, Chr31G002770 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g17739 |