Basic Information
Locus ID:
Chr31G002610
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000031 | 4512015 | 4516439 | + | Chr31G002610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 197 | 306 | 2.94621E-6 | - |
| Pfam | PF18052 | Rx N-terminal domain | 11 | 94 | 2.3E-15 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 174 | 420 | 2.3E-38 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 487 | 786 | 6.8E-21 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 165 | 424 | 2.47E-54 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 328 | 409 | 8.6E-7 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 157 | 321 | 1.2E-32 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 410 | 500 | 1.0E-11 | IPR036388 |
| Gene3D | G3DSA:1.20.5.4130 | - | 10 | 121 | 8.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 511 | 790 | 5.4E-22 | IPR032675 |
| SMART | SM00382 | AAA_5 | 191 | 355 | 0.0034 | IPR003593 |
| PRINTS | PR00364 | Disease resistance protein signature | 194 | 209 | 8.6E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 267 | 281 | 8.6E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 363 | 377 | 8.6E-14 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 561 | 577 | 8.6E-14 | - |
| Coils | Coil | Coil | 123 | 143 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46730.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_004978729.2 | LOW QUALITY PROTEIN: uncharacterized protein LOC101767946 [Setaria italica] | 0 |
| Q2R8L1 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SXD5 | AAA domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_50794 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology