HalophFGD

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Basic Information
Locus ID: Chr30G008830
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Protein of unknown function (DUF295)
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000030 10406534 10407899 - Chr30G008830
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 280 322 1.1E-8 IPR005174
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025826177.1 uncharacterized protein LOC112901466 [Panicum hallii] 0
TrEMBL A0A835EQQ0 DUF295 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_032230 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000029071
Apiaceae Apium graveolens 1 Ag10G00760
Poaceae Echinochloa crus-galli 14 AH01.4084, AH02.1851, AH02.1852, AH05.3002, AH07.2695 ...
BH02.1888, BH05.3052, BH07.2521, BH07.2522, BH09.1446, BH09.1447, CH05.3070, CH07.2583, CH09.1557
Poaceae Eleusine coracana subsp. coracana 14 gene-QOZ80_1AG0036900, gene-QOZ80_1BG0086930 ...
gene-QOZ80_4AG0313820, gene-QOZ80_4AG0313860, gene-QOZ80_4AG0313900, gene-QOZ80_4BG0344960, gene-QOZ80_4BG0344970, gene-QOZ80_4BG0344980, gene-QOZ80_4BG0345040, gene-QOZ80_4BG0345060, gene-QOZ80_5AG0366350, gene-QOZ80_5BG0414130, gene-QOZ80_5BG0414140, gene-QOZ80_8BG0662360
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.2HG0107280.1.CDS1 ...
HORVU.MOREX.r3.2HG0107320.1.CDS1, HORVU.MOREX.r3.2HG0107350.1.CDS1, HORVU.MOREX.r3.2HG0174820.1.CDS1, HORVU.MOREX.r3.3HG0221070.1.CDS1
Poaceae Lolium multiflorum 8 gene-QYE76_009182, gene-QYE76_019489, gene-QYE76_026177 ...
gene-QYE76_026790, gene-QYE76_026847, gene-QYE76_028626, gene-QYE76_028758, gene-QYE76_044666
Poaceae Oryza coarctata 8 Oco07G008360, Oco07G008480, Oco08G008260, Oco14G006340 ...
Oco15G001090, Oco15G001100, Oco16G001230, Oco16G001240
Poaceae Oryza sativa 5 LOC_Os04g39660.1, LOC_Os07g23890.1, LOC_Os08g03300.1 ...
LOC_Os08g03320.1, LOC_Os08g03330.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G420300, gene-BS78_06G131300, gene-BS78_K005000 ...
gene-BS78_06G132900
Poaceae Puccinellia tenuiflora 7 Pt_Chr0200459, Pt_Chr0200460, Pt_Chr0200473, Pt_Chr0302381 ...
Pt_Chr0302382, Pt_Chr0404403, Pt_Chr0404406
Poaceae Sporobolus alterniflorus 14 Chr02G007040, Chr0G009410, Chr11G023100, Chr13G006840 ...
Chr18G013930, Chr22G003650, Chr23G010790, Chr23G010800, Chr23G010810, Chr25G008950, Chr26G008910, Chr26G008920, Chr26G008960, Chr30G008830
Poaceae Thinopyrum elongatum 3 Tel2E01G582500, Tel2E01G583000, Tel4E01G012600
Poaceae Triticum dicoccoides 3 gene_TRIDC2AG048650, gene_TRIDC2BG051310 ...
gene_TRIDC4BG001430
Poaceae Triticum aestivum 16 TraesCS2A02G078500.1.cds1, TraesCS2A02G078600.1.cds1 ...
TraesCS2A02G329500.1.cds1, TraesCS2A02G329600.1.cds1, TraesCS2A02G329900.1.cds1, TraesCS2B02G093700.1.cds1, TraesCS2B02G352400.1.cds1, TraesCS2B02G352800.1.cds1, TraesCS2D02G332800.1.cds1, TraesCS2D02G333200.1.cds1, TraesCS3B02G606000.1, TraesCS4A02G310900.1.cds1, TraesCS4A02G311500.1.cds1, TraesCS4D02G002600.1.cds1, TraesCS5A02G054600.1.cds1, TraesCSU02G054900.1
Poaceae Zea mays 4 Zm00001eb031200_P001, Zm00001eb061950_P001 ...
Zm00001eb079930_P001, Zm00001eb424780_P001
Poaceae Zoysia japonica 3 nbis-gene-25133, nbis-gene-54288, nbis-gene-7419
Poaceae Zoysia macrostachya 2 Zma_g21451, Zma_g28599
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.