Basic Information
Locus ID:
Chr30G007130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000030 | 8061676 | 8064255 | - | Chr30G007130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 481 | 779 | 1.45318E-85 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 478 | 777 | 3.1E-41 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 120 | 350 | 3.01E-12 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 778 | 9.44E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 451 | 569 | 3.8E-28 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 88 | 325 | 4.7E-8 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 794 | 3.6E-51 | - |
| SMART | SM00220 | serkin_6 | 475 | 782 | 6.6E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 781 | 36.456547 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 481 | 503 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 618 | 630 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_025825028.1 | serine/threonine-protein kinase-like protein CCR4 [Panicum hallii] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5V5X4 | Serine/threonine-protein kinase-like protein CCR4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0018547 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology