Basic Information
Locus ID:
Chr30G006170
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000030 | 6741608 | 6745503 | + | Chr30G006170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 305 | 353 | 2.3E-9 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 272 | 355 | 8.14E-15 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 41 | 253 | 1.51E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 40 | 262 | 7.8E-13 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 303 | 355 | 3.9E-15 | - |
| SMART | SM00326 | SH3_2 | 301 | 356 | 9.7E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 298 | 357 | 18.937851 | IPR001452 |
| Coils | Coil | Coil | 239 | 259 | - | - |
| Coils | Coil | Coil | 144 | 171 | - | - |
| Coils | Coil | Coil | 215 | 235 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_004976396.1 | SH3 domain-containing protein 2 [Setaria italica] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CY14 | SH3 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G228700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology