Basic Information
Locus ID:
Chr30G003110
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000030 | 2554396 | 2560990 | + | Chr30G003110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 689 | 951 | 1.04106E-97 | - |
| Pfam | PF11721 | Malectin domain | 417 | 602 | 5.4E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 687 | 951 | 3.9E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 661 | 951 | 2.32E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 85 | 386 | 5.61E-50 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 413 | 605 | 9.0E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 657 | 758 | 8.8E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 199 | 1.7E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 299 | 4.1E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 759 | 968 | 1.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 410 | 6.5E-14 | IPR032675 |
| SMART | SM00220 | serkin_6 | 683 | 951 | 4.2E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 957 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 711 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 803 | 815 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 977 | 1022 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 977 | 995 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_025826032.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Panicum hallii] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2T7CZX8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G283300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology