Basic Information
Locus ID:
Chr30G000290
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000030 | 355729 | 358204 | + | Chr30G000290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 321 | 547 | 5.3E-73 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 72 | 281 | 2.5E-79 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 339 | 513 | 3.3E-224 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 81 | 550 | 3.3E-224 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 84 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_034585765.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Setaria viridis] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6V9J0 | ribonuclease P OS=Setaria viridis OX=4556 GN=SEVIR_3G002400v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology