Basic Information
Locus ID:
Chr29G011720
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 35749490 | 35752535 | - | Chr29G011720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 280 | 339 | 1.0E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 80 | 2.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 702 | 905 | 2.6E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 426 | 484 | 7.7E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 412 | 2.72E-64 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 342 | 608 | 4.71E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 967 | 9.98E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 349 | 625 | 1.4E-64 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 703 | 767 | 1.3E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 107 | 2.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 108 | 348 | 4.4E-73 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 988 | 3.7E-57 | - |
| SMART | SM00220 | serkin_6 | 697 | 967 | 1.9E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 278 | 301 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 569 | 592 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 230 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 472 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 302 | 326 | 6.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 134 | 158 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 350 | 374 | 41.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 988 | 36.894699 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 726 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 305 | 318 | 2.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 447 | 460 | 2.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 989 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039817449.1 | leucine-rich repeat receptor-like protein kinase TDR [Panicum virgatum] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SRM8 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52877 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology