Basic Information
Locus ID:
Chr29G010030
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 32141460 | 32144858 | + | Chr29G010030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 82 | 118 | 2.6E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 218 | 491 | 1.02E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 69 | 131 | 1.83E-13 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 301 | 1.0E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 80 | 138 | 2.7E-8 | - |
| SMART | SM00256 | fbox_2 | 86 | 125 | 1.4E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 80 | 116 | 9.68293 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 562 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 51 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 0 |
| RefSeq | XP_039853295.1 | uncharacterized protein LOC120711732 [Panicum virgatum] | 0 |
| Q1PE04 | F-box/LRR-repeat protein 25 OS=Arabidopsis thaliana OX=3702 GN=FBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0RAK6 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG094800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology