Basic Information
Locus ID:
Chr29G009170
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 29245704 | 29280743 | + | Chr29G009170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 359 | 620 | 1.41856E-91 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 252 | 1.2E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 46 | 132 | 6.7E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 354 | 555 | 1.6E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 621 | 6.74E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 427 | 1.4E-28 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 40 | 134 | 1.1E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 256 | 4.2E-20 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 634 | 7.0E-61 | - |
| SMART | SM00220 | serkin_6 | 353 | 623 | 1.8E-28 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 135 | 11.944696 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 141 | 256 | 16.325912 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 628 | 36.569618 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 359 | 381 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 661 | 681 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 667 | 681 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.3 | - | 0 |
| RefSeq | XP_052151438.1 | cysteine-rich receptor-like protein kinase 10 [Oryza glaberrima] | 0 |
| O65472 | Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=CRK12 PE=3 SV=3 | 0 | |
| TrEMBL | A0A5J9W2L7 | Cysteine-rich receptor-like protein kinase 25 OS=Eragrostis curvula OX=38414 GN=EJB05_08526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology