Basic Information
Locus ID:
Chr29G009130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 29150323 | 29155461 | + | Chr29G009130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 373 | 634 | 3.71915E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 368 | 566 | 2.2E-43 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 164 | 264 | 1.1E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 55 | 142 | 5.0E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 356 | 635 | 5.88E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 47 | 144 | 4.5E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 643 | 1.7E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 152 | 268 | 4.5E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 441 | 2.1E-29 | - |
| SMART | SM00220 | serkin_6 | 367 | 637 | 2.4E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 367 | 642 | 36.202133 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 151 | 268 | 17.303539 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 43 | 145 | 12.632656 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 373 | 395 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 487 | 499 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11460.3 | - | 0 |
| RefSeq | XP_002444104.2 | cysteine-rich receptor-like protein kinase 15 isoform X2 [Sorghum bicolor] | 0 |
| Q9LDT0 | Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana OX=3702 GN=CRK30 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9W2L7 | Cysteine-rich receptor-like protein kinase 25 OS=Eragrostis curvula OX=38414 GN=EJB05_08526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology