Basic Information
Locus ID:
Chr29G007680
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 17839078 | 17849438 | + | Chr29G007680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 411 | 451 | 6.82E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 406 | 458 | 8.0E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 378 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 590 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 573 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 548 | - | - |
| Coils | Coil | Coil | 21 | 45 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_020401239.1 | enolase-phosphatase E1 [Zea mays] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6J9J9 | Tudor domain-containing protein OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d025789 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology