Basic Information
Locus ID:
Chr29G007540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 16490394 | 16508047 | + | Chr29G007540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 672 | 730 | 4.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 375 | 437 | 1.0E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 485 | 544 | 9.7E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 864 | 1006 | 1.3E-11 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1015 | 1116 | 1.4E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 842 | 1118 | 3.93E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 324 | 743 | 9.35E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 390 | 1.5E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 143 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1008 | 1135 | 1.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 955 | 1007 | 2.7E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 822 | 934 | 1.3E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 762 | 5.7E-245 | IPR032675 |
| Gene3D | G3DSA:3.30.1490.310 | - | 586 | 643 | 5.7E-245 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 861 | 1134 | 17.644192 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 867 | 890 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_020408140.2 | LOW QUALITY PROTEIN: brassinosteroid LRR receptor kinase BRL3 [Zea mays] | 0 |
| Q6ZCZ2 | Brassinosteroid LRR receptor kinase BRL3 OS=Oryza sativa subsp. japonica OX=39947 GN=BRL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811R6G3 | non-specific serine/threonine protein kinase OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS48957 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology