Basic Information
Locus ID:
Chr29G003460
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Phospho-2-dehydro-3-deoxyheptonate aldolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 3815278 | 3822163 | + | Chr29G003460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01474 | Class-II DAHP synthetase family | 66 | 502 | 1.1E-196 | IPR002480 |
| SUPERFAMILY | SSF51569 | Aldolase | 60 | 506 | 4.1E-199 | - |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 267 | 507 | 4.4E-107 | IPR013785 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 99 | 266 | 1.1E-50 | IPR013785 |
| TIGRFAM | TIGR01358 | DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase | 66 | 509 | 8.3E-227 | IPR002480 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
map00400 (Phenylalanine, tyrosine and tryptophan biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
ko02024 (Quorum sensing)
map02024 (Quorum sensing)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22410.1 | Class-II DAHP synthetase family protein. | 0 |
| RefSeq | XP_025820373.1 | phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic-like [Panicum hallii] | 0 |
| A0A067XH53 | Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Petunia hybrida OX=4102 GN=DAHP1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7D8T8 | Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G231600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology