Basic Information
Locus ID:
Chr29G002050
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 1938566 | 1939495 | - | Chr29G002050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 35 | 301 | 1.5E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 304 | 1.12E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 309 | 8.9E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 108 | 5.4E-22 | - |
| SMART | SM00220 | serkin_6 | 32 | 304 | 2.1E-19 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 24 | 309 | 5.3E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 304 | 32.809975 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 153 | 165 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 38 | 61 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 0 |
| RefSeq | XP_015613284.1 | wall-associated receptor kinase 1 [Oryza sativa Japonica Group] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9T196 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48178 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology