Basic Information
Locus ID:
Chr29G000890
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 825988 | 826988 | + | Chr29G000890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 163 | 195 | 3.08E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 162 | 205 | 2.0E-7 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 51 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022681951.1 | probable E3 ubiquitin-protein ligase RHY1A, partial [Setaria italica] | 0 |
| TrEMBL | A0A368QR74 | RING-type domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_4G051900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Chr29G000890.