Basic Information
Locus ID:
Chr29G000880
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BAG family molecular chaperone regulator
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000029 | 820155 | 822212 | + | Chr29G000880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02179 | BAG domain | 155 | 225 | 2.8E-12 | IPR003103 |
| Pfam | PF00240 | Ubiquitin family | 56 | 124 | 7.9E-7 | IPR000626 |
| SUPERFAMILY | SSF63491 | BAG domain | 109 | 231 | 3.27E-19 | IPR036533 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 45 | 129 | 8.71E-16 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 55 | 125 | 3.9E-20 | - |
| Gene3D | G3DSA:1.20.58.120 | BAG domain | 126 | 231 | 8.5E-35 | IPR036533 |
| SMART | SM00264 | BAG_1 | 146 | 227 | 0.007 | IPR003103 |
| ProSiteProfiles | PS51035 | BAG domain profile. | 146 | 227 | 9.818421 | IPR003103 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 56 | 124 | 10.680043 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 317 | - | - |
| Coils | Coil | Coil | 209 | 229 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52060.1 | BCL-2-associated athanogene 1. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. | 0 |
| RefSeq | XP_025822705.1 | BAG family molecular chaperone regulator 1-like [Panicum hallii] | 0 |
| Q0WUQ1 | BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0RKQ7 | BAG family molecular chaperone regulator 1 OS=Panicum virgatum OX=38727 GN=PVAP13_6KG397000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology