HalophFGD

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Basic Information
Locus ID: Chr28G012140
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000028 33983674 33984669 - Chr28G012140
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 20 73 4.91E-7 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044954730.1 uncharacterized protein LOC123404848 [Hordeum vulgare subsp. vulgare] 0
TrEMBL A0A5J9VPC9 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10675 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.3980, BH03.4297, BH03.4300, BH03.4301, BH03.4302 ...
BH03.4303, BH03.4304, BH03.70, BH05.541, CH01.2488, CH05.614, CH07.210, CH07.211
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_3AG0241990, gene-QOZ80_5AG0385880 ...
gene-QOZ80_5BG0433150, gene-QOZ80_7AG0580510, gene-QOZ80_7AG0580530, gene-QOZ80_7AG0580540, gene-QOZ80_7BG0611680, gene-QOZ80_7BG0611690
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0017790.1.CDS1 ...
HORVU.MOREX.r3.1HG0042970.1.CDS1, HORVU.MOREX.r3.6HG0541110.1.CDS1
Poaceae Paspalum vaginatum 3 gene-BS78_02G380500, gene-BS78_04G264700 ...
gene-BS78_04G264800
Poaceae Sporobolus alterniflorus 2 Chr24G014800, Chr28G012140
Poaceae Thinopyrum elongatum 2 Tel6E01G041900, Tel6E01G099200
Poaceae Triticum aestivum 6 TraesCS6A02G008900.1.cds1, TraesCS6A02G011200.1.cds1 ...
TraesCS6D02G013900.1.cds1, TraesCS6D02G032700.1, TraesCS6D02G044100.1, TraesCSU02G161200.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-33189
Poaceae Zoysia macrostachya 1 Zma_g5731
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.