Basic Information
Locus ID:
Chr28G011120
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 32644504 | 32648158 | + | Chr28G011120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 799 | 1067 | 2.27932E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 530 | 590 | 3.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 796 | 993 | 1.5E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 131 | 148 | 1.6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 367 | 387 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 602 | 662 | 7.6E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 155 | 215 | 6.3E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 5.2E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 775 | 1064 | 1.31E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 98 | 656 | 4.08E-69 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 96 | 292 | 8.0E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 757 | 868 | 8.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 475 | 2.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 95 | 1.4E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 477 | 691 | 8.0E-50 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 869 | 1074 | 2.7E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 202 | 226 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 152 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 625 | 648 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 624 | 3.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 39.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 793 | 1071 | 1.4E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 577 | 600 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 200 | 14.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 793 | 1075 | 39.028934 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 131 | 153 | 7.1113 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 799 | 821 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 913 | 925 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_002460974.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sorghum bicolor] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T8KSS3 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_2G439400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology