halophFGD

Basic Information

Locus ID: Chr28G009940

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Copper amine oxidase, enzyme domain

Maps and Mapping Data

Chromosome/Scaffold	Start	End	Strand	ID
GWHCBIM00000028	30448631	30450891	+	Chr28G009940

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02728	Copper amine oxidase, N3 domain	108	207	2.8E-20	IPR015802
SUPERFAMILY	SSF54416	Amine oxidase N-terminal region	106	214	4.25E-35	IPR016182
Gene3D	G3DSA:3.10.450.40	-	109	204	7.2E-31	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	20	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	228	256	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	213	256	-	-

Gene Ontology

Biological Process:

GO:0009308 (amine metabolic process)

Molecular Function:

GO:0005507 (copper ion binding) GO:0008131 (primary methylamine oxidase activity) GO:0048038 (quinone binding)

KEGG Pathway

KO Term:

K00276 (primary-amine oxidase [EC:1.4.3.21])

Pathway:

ko00260 (Glycine, serine and threonine metabolism) map00260 (Glycine, serine and threonine metabolism) ko00350 (Tyrosine metabolism) map00350 (Tyrosine metabolism) ko00360 (Phenylalanine metabolism) map00360 (Phenylalanine metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko00950 (Isoquinoline alkaloid biosynthesis) map00950 (Isoquinoline alkaloid biosynthesis) ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide) R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide) R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide) R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia) R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide) R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide) R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G31670.1	Copper amine oxidase family protein.
RefSeq	XP_052161877.1	amine oxidase [copper-containing] alpha 2, peroxisomal-like [Oryza glaberrima]
Swiss-Prot	P49252	Primary amine oxidase (Fragment) OS=Lens culinaris OX=3864 PE=1 SV=3
TrEMBL	A0A0P0X7R7	Amine oxidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0572050 PE=1 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg12557, jg23376, jg27588, jg27899, jg27901, jg37223 ... jg37224
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14835, gene_15551
Amaranthaceae	Atriplex hortensis	4	Ah004711, Ah004715, Ah011665, Ah020336
Amaranthaceae	Beta vulgaris	5	BVRB_5g098280, BVRB_5g098290, BVRB_5g098350, BVRB_5g098370 ... BVRB_5g108020
Amaranthaceae	Salicornia bigelovii	8	Sbi_jg31372, Sbi_jg4867, Sbi_jg4872, Sbi_jg57907, Sbi_jg6998 ... Sbi_jg57908, Sbi_jg7229, Sbi_jg7230
Amaranthaceae	Salicornia europaea	4	Seu_jg12778, Seu_jg12779, Seu_jg13104, Seu_jg25539
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00001478, GOSA_00001479, GOSA_00001480, GOSA_00001481 ... GOSA_00001486, GOSA_00001487, GOSA_00003955, GOSA_00003956
Amaranthaceae	Suaeda glauca	16	Sgl00133, Sgl00137, Sgl00281, Sgl00287, Sgl05195, Sgl05337 ... Sgl05343, Sgl18224, Sgl51632, Sgl51633, Sgl51642, Sgl56936, Sgl56937, Sgl56938, Sgl56945, Sgl56946
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000007109, gene:ENSEOMG00000013615 ... gene:ENSEOMG00000013798, gene:ENSEOMG00000020876, gene:ENSEOMG00000022059, gene:ENSEOMG00000024552, gene:ENSEOMG00000030867, gene:ENSEOMG00000037412, gene:ENSEOMG00000046903, gene:ENSEOMG00000050257
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.3AG0015250, CQ.Regalona.r1.3BG0014590 ... CQ.Regalona.r1.5AG0000730, CQ.Regalona.r1.5BG0000860, CQ.Regalona.r1.5BG0000920, CQ.Regalona.r1.9AG0010050, CQ.Regalona.r1.9BG0012380
Anacardiaceae	Pistacia vera	5	pistato.v30143350, pistato.v30143370, pistato.v30191620 ... pistato.v30236890, pistato.v30236910
Apiaceae	Apium graveolens	4	Ag6G01755, Ag8G01597, Ag9G02437, Ag9G02438
Arecaceae	Cocos nucifera	5	COCNU_06G014360, COCNU_07G001890, COCNU_14G012350 ... COCNU_14G012360, COCNU_14G012370
Arecaceae	Phoenix dactylifera	1	gene-LOC103706132
Asparagaceae	Asparagus officinalis	3	AsparagusV1_01.1268.V1.1, AsparagusV1_03.1540.V1.1 ... AsparagusV1_10.124.V1.1
Asteraceae	Flaveria trinervia	2	Ftri15G25881, Ftri7G33144
Brassicaceae	Arabidopsis thaliana	9	AT1G31670.1, AT1G31690.1, AT1G31710.1, AT1G62810.1 ... AT3G43670.1, AT4G12270.1, AT4G12280.1, AT4G12290.1, AT4G14940.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10006982m.g.v1.0, Thhalv10007005m.g.v1.0 ... Thhalv10023306m.g.v1.0, Thhalv10024636m.g.v1.0, Thhalv10028460m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g27360.v2.2, Sp2g01790.v2.2, Sp6g05290.v2.2 ... Sp7g13090.v2.2
Brassicaceae	Brassica nigra	9	BniB01g032540.2N, BniB01g032550.2N, BniB02g058720.2N ... BniB05g021160.2N, BniB05g056570.2N, BniB05g056590.2N, BniB07g018960.2N, BniB07g019010.2N, BniB07g019020.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq03G0141, Ceq03G0145, Ceq09G1332, Ceq09G1339, Ceq09G1340
Casuarinaceae	Casuarina glauca	7	Cgl03G0159, Cgl03G0163, Cgl03G0172, Cgl09G1422, Cgl09G1428 ... Cgl09G1429, Cgl09G1430
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno06g11650, gene.Cymno18g02970
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g03650, gene.Thate02g07180, gene.Thate02g23120 ... gene.Thate02g37610
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-4973, nbisL1-mrna-5425
Nitrariaceae	Nitraria sibirica	8	evm.TU.LG10.1253, evm.TU.LG11.1048, evm.TU.LG11.1050 ... evm.TU.LG11.1052, evm.TU.LG11.1053, evm.TU.LG11.1054, evm.TU.LG11.1055, evm.TU.LG11.1056
Plantaginaceae	Plantago ovata	4	Pov_00004232, Pov_00004236, Pov_00022685, Pov_00026221
Plumbaginaceae	Limonium bicolor	4	Lb2G08954, Lb2G08955, Lb2G08956, Lb2G08962
Poaceae	Echinochloa crus-galli	17	AH03.3407, AH03.3409, AH03.3410, AH03.759, AH03.807, AH08.47 ... AH09.407, BH03.3638, BH03.3639, BH03.3640, BH03.894, BH03.930, BH07.2377, CH03.1004, CH03.1059, CH03.3836, CH07.2454
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_4AG0323880, gene-QOZ80_4BG0354440 ... gene-QOZ80_7AG0562390, gene-QOZ80_7AG0573670, gene-QOZ80_7BG0588850, gene-QOZ80_7BG0593540, gene-QOZ80_7BG0604960
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.2HG0106870.1, HORVU.MOREX.r3.4HG0403000.1 ... HORVU.MOREX.r3.4HG0403010.1
Poaceae	Lolium multiflorum	10	gene-QYE76_030432, gene-QYE76_037523, gene-QYE76_038470 ... gene-QYE76_038471, gene-QYE76_040144, gene-QYE76_040146, gene-QYE76_040195, gene-QYE76_040206, gene-QYE76_040558, gene-QYE76_048127
Poaceae	Oryza coarctata	5	Oco07G002130, Oco07G002170, Oco12G009660, Oco13G010580 ... Oco14G011280
Poaceae	Oryza sativa	4	LOC_Os04g20164.1, LOC_Os06g23114.1, LOC_Os06g23140.1 ... LOC_Os12g27110.1
Poaceae	Paspalum vaginatum	5	gene-BS78_02G115000, gene-BS78_02G115100, gene-BS78_K230200 ... gene-BS78_02G322300, gene-BS78_02G322400
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0304502, Pt_Chr0304582, Pt_Chr0304584, Pt_Chr0304586 ... Pt_Chr0305534
Poaceae	Sporobolus alterniflorus	3	Chr24G010730, Chr26G003080, Chr28G009940
Poaceae	Thinopyrum elongatum	2	Tel2E01G167800, Tel4E01G474900
Poaceae	Triticum dicoccoides	4	gene_TRIDC2AG008460, gene_TRIDC2BG010180 ... gene_TRIDC4AG002880, gene_TRIDC4BG048750
Poaceae	Triticum aestivum	6	TraesCS2A02G076300.1, TraesCS2B02G091300.1 ... TraesCS2D02G075000.1, TraesCS4A02G020900.1, TraesCS4B02G282700.1, TraesCS4D02G281700.1
Poaceae	Zea mays	2	Zm00001eb107350_P001, Zm00001eb420190_P001
Poaceae	Zoysia japonica	3	nbis-gene-27649, nbis-gene-52772, nbis-gene-631
Poaceae	Zoysia macrostachya	3	Zma_g19383, Zma_g4996, Zma_g6695
Portulacaceae	Portulaca oleracea	11	evm.TU.LG05.2210, evm.TU.LG05.2211, evm.TU.LG10.220 ... evm.TU.LG10.223, evm.TU.LG10.224, evm.TU.LG10.225, evm.TU.LG10.227, evm.TU.LG17.212, evm.TU.LG17.215, evm.TU.LG17.216, evm.TU.LG17.218
Posidoniaceae	Posidonia oceanica	1	gene.Posoc07g06940
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_16_RagTag.284, evm.TU.Scaffold_16_RagTag.285 ... evm.TU.Scaffold_3_RagTag.448, evm.TU.Scaffold_3_RagTag.449, evm.TU.Scaffold_3_RagTag.450
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-1468, nbisL1-mrna-1469, nbisL1-mrna-1470 ... nbisL1-mrna-22520, nbisL1-mrna-22521, nbisL1-mrna-31011, nbisL1-mrna-31012
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-5210, nbisL1-mrna-5211, nbisL1-mrna-6484 ... nbisL1-mrna-6485, nbisL1-mrna-6486
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-20239, nbisL1-mrna-6178, nbisL1-mrna-6179 ... nbisL1-mrna-6180, nbisL1-mrna-6181, nbisL1-mrna-6182
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000019l.393, evm.TU.utg000019l.949 ... evm.TU.utg000019l.950, evm.TU.utg000022l.320, evm.TU.utg000022l.321
Rhizophoraceae	Kandelia obovata	4	Maker00012751, Maker00012803, Maker00014370, Maker00014379
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-18129, nbisL1-mrna-3461, nbisL1-mrna-3462 ... nbisL1-mrna-6348, nbisL1-mrna-6349
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-2118, nbisL1-mrna-2119, nbisL1-mrna-6592 ... nbisL1-mrna-6593, nbisL1-mrna-6594
Salicaceae	Populus euphratica	6	populus_peu03428, populus_peu03429, populus_peu07374 ... populus_peu21373, populus_peu21374, populus_peu21375
Solanaceae	Lycium barbarum	5	gene-LOC132611042, gene-LOC132611043, gene-LOC132618551 ... gene-LOC132635052, gene-LOC132636385
Solanaceae	Solanum chilense	3	SOLCI000977800, SOLCI002989600, SOLCI003526200
Solanaceae	Solanum pennellii	4	gene-LOC107012994, gene-LOC107028398, gene-LOC107030442 ... gene-LOC107030611
Tamaricaceae	Reaumuria soongarica	2	STRG.24031_chr05_-, gene_9347
Tamaricaceae	Tamarix chinensis	1	TC01G2883
Zosteraceae	Zostera marina	1	Zosma02g06220.v3.1