Basic Information
Locus ID:
Chr28G009520
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 29543189 | 29549063 | - | Chr28G009520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 0.0012 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 507 | 770 | 2.5E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 478 | 770 | 4.47E-54 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 244 | 4.03E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 178 | 4.0E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 578 | 781 | 3.7E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 464 | 575 | 4.6E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 252 | 3.0E-12 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 775 | 27.919609 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 275 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20850.1 | STRUBBELIG-receptor family 1. | 0 |
| RefSeq | XP_039830858.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X3 [Panicum virgatum] | 0 |
| Q06BH3 | Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana OX=3702 GN=SRF1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U6W1B4 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G365700v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology