HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Chr28G009300
Species & Taxonomic ID: Sporobolus alterniflorus & 29706
Genome Assembly: GWHCBIM00000000
Description: Wound-induced protein
Maps and Mapping Data
Chromosome Start End Strand ID
GWHCBIM00000028 29036047 29036265 + Chr28G009300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
0.00 0.00 Da 0.00 0.00 0.00
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039830298.1 uncharacterized protein LOC120691319 [Panicum virgatum] 0
TrEMBL A0A811NJ86 Secreted protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS15909 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 1 jg20353
Aizoaceae Mesembryanthemum crystallinum 1 gene_22182
Amaranthaceae Atriplex hortensis 6 Ah008371, Ah008372, Ah008373, Ah008374, Ah008375, Ah008377
Amaranthaceae Salicornia bigelovii 16 Sbi_jg18779, Sbi_jg18780, Sbi_jg18781, Sbi_jg18782 ...
Sbi_jg18785, Sbi_jg18786, Sbi_jg18787, Sbi_jg18790, Sbi_jg37212, Sbi_jg37213, Sbi_jg37214, Sbi_jg37215, Sbi_jg37216, Sbi_jg37217, Sbi_jg37220, Sbi_jg37222
Amaranthaceae Salicornia europaea 10 Seu_jg5036, Seu_jg5037, Seu_jg5038, Seu_jg5040, Seu_jg5041 ...
Seu_jg5042, Seu_jg5043, Seu_jg5044, Seu_jg5045, Seu_jg5047
Amaranthaceae Suaeda aralocaspica 6 GOSA_00006977, GOSA_00006978, GOSA_00006979, GOSA_00006980 ...
GOSA_00006981, GOSA_00013573
Amaranthaceae Suaeda glauca 16 Sgl14564, Sgl22977, Sgl22978, Sgl28043, Sgl28046, Sgl28047 ...
Sgl28087, Sgl28088, Sgl28090, Sgl31385, Sgl36231, Sgl36700, Sgl43861, Sgl45728, Sgl48630, Sgl50483
Amaranthaceae Chenopodium quinoa 11 CQ.Regalona.r1.4AG0020720, CQ.Regalona.r1.4AG0020730 ...
CQ.Regalona.r1.4AG0020740, CQ.Regalona.r1.4AG0020750, CQ.Regalona.r1.4AG0020780, CQ.Regalona.r1.4BG0021660, CQ.Regalona.r1.4BG0021680, CQ.Regalona.r1.4BG0021690, CQ.Regalona.r1.4BG0021700, CQ.Regalona.r1.4BG0021710, CQ.Regalona.r1.8BG0004010
Anacardiaceae Pistacia vera 4 pistato.v30015820, pistato.v30015830, pistato.v30019260 ...
pistato.v30160290
Apiaceae Apium graveolens 2 Ag4G02030, Ag9G00905
Arecaceae Cocos nucifera 16 COCNU_04G007870, COCNU_06G010040, COCNU_06G010050 ...
COCNU_12G004000, scaffold006752G000010, scaffold006919G000010, scaffold006919G000030, scaffold006919G000040, scaffold006919G000050, scaffold010876G000010, scaffold010876G000020, scaffold012883G000010, scaffold014963G000010, scaffold014963G000020, scaffold018904G000020, scaffold025124G000010
Arecaceae Phoenix dactylifera 6 gene-LOC103698874, gene-LOC103698875, gene-LOC103723501 ...
gene-LOC103723903, gene-LOC103723904, gene-LOC113463394
Asparagaceae Asparagus officinalis 7 AsparagusV1_03.850.V1.1, AsparagusV1_03.852.V1.1 ...
AsparagusV1_03.853.V1.1, AsparagusV1_03.855.V1.1, AsparagusV1_03.856.V1.1, AsparagusV1_08.2645.V1.1, AsparagusV1_08.2760.V1.1
Asteraceae Flaveria trinervia 10 Ftri13G00846, Ftri13G05458, Ftri13G16643, Ftri13G18819 ...
Ftri13G19870, Ftri16G03466, Ftri2G07172, Ftri3G04251, Ftri3G09491, Ftri3G11794
Brassicaceae Arabidopsis thaliana 4 AT4G05070.1, AT4G10265.1, AT4G10270.1, AT4G33560.1
Brassicaceae Eutrema salsugineum 4 Thhalv10009208m.g.v1.0, Thhalv10009214m.g.v1.0 ...
Thhalv10009215m.g.v1.0, Thhalv10029473m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp1g28760.v2.2, Sp6g07160.v2.2, Sp6g07170.v2.2
Brassicaceae Brassica nigra 12 BniB03g009440.2N, BniB04g050350.2N, BniB04g050360.2N ...
BniB04g050370.2N, BniB04g050390.2N, BniB04g050430.2N, BniB05g058680.2N, BniB08g038380.2N, BniB08g047120.2N, BniB08g060650.2N, BniB08g060690.2N, BniB08g060730.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq01G1157
Casuarinaceae Casuarina glauca 1 Cgl01G1305
Cymodoceaceae Cymodocea nodosa 9 gene.Cymno08g02270, gene.Cymno08g02280, gene.Cymno08g02290 ...
gene.Cymno08g02300, gene.Cymno08g02310, gene.Cymno08g02330, gene.Cymno08g02340, gene.Cymno17g00080, gene.Cymno17g00330
Hydrocharitaceae Thalassia testudinum 12 gene.Thate01g14780, gene.Thate04g04500, gene.Thate04g04520 ...
gene.Thate04g04530, gene.Thate04g04560, gene.Thate04g04570, gene.Thate04g04580, gene.Thate04g04590, gene.Thate05g29000, gene.Thate05g29010, gene.Thate05g29030, gene.Thate06g10830
Malvaceae Hibiscus hamabo Siebold & Zucc. 4 nbisL1-mrna-1053, nbisL1-mrna-8083, nbisL1-mrna-9160 ...
nbisL1-mrna-9161
Nitrariaceae Nitraria sibirica 3 evm.TU.LG04.1946, evm.TU.LG04.1947, evm.TU.LG05.1704
Plantaginaceae Plantago ovata 5 Pov_00009014, Pov_00033414, Pov_00033417, Pov_00038158 ...
Pov_00038209
Poaceae Echinochloa crus-galli 22 AH03.3359, AH03.3360, AH06.2734, AH07.438, AH09.2416 ...
AH09.2417, AH09.2418, BH03.3542, BH03.3543, BH05.2957, BH07.562, BH09.2634, BH09.2635, BH09.2636, CH03.3752, CH03.3753, CH06.2835, CH07.422, CH09.2856, CH09.2857, CH09.2858, CH09.2860
Poaceae Eleusine coracana subsp. coracana 15 gene-QOZ80_2BG0155630, gene-QOZ80_4AG0302400 ...
gene-QOZ80_4AG0302420, gene-QOZ80_4AG0302430, gene-QOZ80_4AG0302440, gene-QOZ80_4BG0333370, gene-QOZ80_4BG0333380, gene-QOZ80_4BG0333390, gene-QOZ80_4BG0333400, gene-QOZ80_6AG0548490, gene-QOZ80_6BG0502180, gene-QOZ80_7AG0572440, gene-QOZ80_7AG0572450, gene-QOZ80_7BG0603890, gene-QOZ80_7BG0603900
Poaceae Hordeum vulgare 10 HORVU.MOREX.r3.2HG0135420.1.CDS1 ...
HORVU.MOREX.r3.2HG0200030.1.CDS1, HORVU.MOREX.r3.2HG0207480.1.CDS1, HORVU.MOREX.r3.2HG0207520.1.CDS1, HORVU.MOREX.r3.2HG0207530.1.CDS1, HORVU.MOREX.r3.2HG0207540.1.CDS1, HORVU.MOREX.r3.2HG0207560.1.CDS1, HORVU.MOREX.r3.2HG0207580.1.CDS1, HORVU.MOREX.r3.2HG0207610.1.CDS1, HORVU.MOREX.r3.7HG0732000.1.CDS1
Poaceae Lolium multiflorum 7 gene-QYE76_046561, gene-QYE76_046565, gene-QYE76_046566 ...
gene-QYE76_046567, gene-QYE76_046569, gene-QYE76_046571, gene-QYE76_046572
Poaceae Oryza coarctata 6 Oco07G016860, Oco07G016870, Oco08G016250, Oco08G016260 ...
Oco12G015790, Oco14G010590
Poaceae Oryza sativa 8 LOC_Os02g06560.1, LOC_Os04g54240.1, LOC_Os04g54300.1 ...
LOC_Os04g54310.1, LOC_Os06g46970.1, LOC_Os07g37280.1, LOC_Os07g37290.1, LOC_Os08g08090.1
Poaceae Paspalum vaginatum 10 gene-BS78_02G314100, gene-BS78_02G314200 ...
gene-BS78_04G045400, gene-BS78_06G245300, gene-BS78_06G245400, gene-BS78_06G245500, gene-BS78_06G245600, gene-BS78_06G245700, gene-BS78_06G245800, gene-BS78_10G234900
Poaceae Puccinellia tenuiflora 3 Pt_Chr0300902, Pt_Chr0300904, Pt_Chr0301021
Poaceae Sporobolus alterniflorus 28 Chr01G035280, Chr05G009960, Chr06G034670, Chr10G011420 ...
Chr10G020620, Chr11G002010, Chr19G004490, Chr23G005210, Chr23G005220, Chr23G005230, Chr23G005240, Chr23G005250, Chr23G005260, Chr23G005280, Chr23G005290, Chr24G009960, Chr25G002490, Chr25G002500, Chr25G002510, Chr25G002520, Chr26G016340, Chr28G009300, Chr30G002450, Chr30G002460, Chr30G002470, Chr30G002480, Chr30G002490, Chr30G002500
Poaceae Thinopyrum elongatum 26 Tel2E01G390300, Tel2E01G390400, Tel2E01G824600 ...
Tel2E01G824800, Tel2E01G824900, Tel2E01G901700, Tel2E01G901800, Tel2E01G902600, Tel2E01G903000, Tel2E01G903100, Tel2E01G904200, Tel2E01G904300, Tel2E01G904700, Tel2E01G904800, Tel2E01G904900, Tel2E01G905000, Tel2E01G905100, Tel2E01G905300, Tel2E01G905400, Tel2E01G905500, Tel2E01G905700, Tel2E01G906100, Tel6E01G284300, Tel7E01G755500, Tel7E01G756500, Tel7E01G756800
Poaceae Triticum dicoccoides 33 gene_TRIDC2AG026650, gene_TRIDC2AG074230 ...
gene_TRIDC2AG074360, gene_TRIDC2AG074390, gene_TRIDC2AG074410, gene_TRIDC2AG074430, gene_TRIDC2AG074440, gene_TRIDC2AG074450, gene_TRIDC2AG074460, gene_TRIDC2AG074470, gene_TRIDC2AG074500, gene_TRIDC2AG074550, gene_TRIDC2BG031110, gene_TRIDC2BG074180, gene_TRIDC2BG074190, gene_TRIDC2BG074210, gene_TRIDC2BG081020, gene_TRIDC2BG081030, gene_TRIDC2BG081040, gene_TRIDC2BG081050, gene_TRIDC2BG081060, gene_TRIDC2BG081070, gene_TRIDC2BG081100, gene_TRIDC2BG081110, gene_TRIDC2BG081120, gene_TRIDC2BG081130, gene_TRIDC2BG081140, gene_TRIDC2BG081270, gene_TRIDC6AG018120, gene_TRIDC7AG062270, gene_TRIDC7AG062290, gene_TRIDC7BG055600, gene_TRIDC7BG055620
Poaceae Triticum aestivum 48 TraesCS2A02G205900.1, TraesCS2A02G531200.1.cds1 ...
TraesCS2A02G531300.1, TraesCS2A02G531400.1.cds1, TraesCS2A02G531500.1.cds1, TraesCS2A02G531800.1.cds1, TraesCS2A02G531900.1.cds1, TraesCS2A02G532000.1.cds1, TraesCS2A02G532100.1.cds1, TraesCS2A02G532200.1.cds1, TraesCS2A02G532400.1.cds1, TraesCS2B02G233100.1.cds1, TraesCS2B02G513800.1.cds1, TraesCS2B02G513900.1.cds1, TraesCS2B02G514000.1.cds1, TraesCS2B02G559800.1.cds1, TraesCS2B02G560800.1.cds1, TraesCS2B02G560900.1.cds1, TraesCS2B02G561000.1.cds1, TraesCS2B02G561100.1.cds1, TraesCS2B02G561200.1.cds1, TraesCS2B02G561300.1.cds1, TraesCS2B02G561400.1.cds1, TraesCS2B02G561500.1.cds1, TraesCS2D02G210300.1.cds1, TraesCS2D02G487000.1.cds1, TraesCS2D02G487100.1.cds1, TraesCS2D02G487200.1.cds1, TraesCS2D02G532000.1, TraesCS2D02G533100.1.cds1, TraesCS2D02G533200.1.cds1, TraesCS2D02G533400.1, TraesCS2D02G533500.1.cds1, TraesCS2D02G533600.1.cds1, TraesCS2D02G533700.1.cds1, TraesCS2D02G533800.1.cds1, TraesCS2D02G533900.1.cds1, TraesCS2D02G534200.1.cds1, TraesCS6A02G134500.1.cds1, TraesCS6B02G162700.1.cds1, TraesCS6D02G123700.1.cds1, TraesCS7A02G448600.1.cds1, TraesCS7A02G449200.1, TraesCS7A02G449400.1.cds1, TraesCS7B02G348300.1, TraesCS7B02G348900.1, TraesCS7D02G437900.1.cds1, TraesCS7D02G438400.1.cds1
Poaceae Zea mays 6 Zm00001eb069310_P001, Zm00001eb069320_P001 ...
Zm00001eb069330_P001, Zm00001eb207660_P001, Zm00001eb225440_P001, Zm00001eb324160_P001
Poaceae Zoysia japonica 8 nbis-gene-22951, nbis-gene-22952, nbis-gene-29921 ...
nbis-gene-40597, nbis-gene-5945, nbis-gene-5947, nbis-gene-707, nbis-gene-9714
Poaceae Zoysia macrostachya 11 Zma_g14979, Zma_g20517, Zma_g20518, Zma_g22038, Zma_g22039 ...
Zma_g22040, Zma_g22041, Zma_g31022, Zma_g33271, Zma_g6651, Zma_g6652
Portulacaceae Portulaca oleracea 5 evm.TU.LG01.2061, evm.TU.LG02.1713, evm.TU.LG09.201 ...
evm.TU.LG14.1239, evm.TU.LG14.1240
Posidoniaceae Posidonia oceanica 11 gene.Posoc10g00480, gene.Posoc10g00500, gene.Posoc10g00510 ...
gene.Posoc10g00520, gene.Posoc10g00530, gene.Posoc10g00550, gene.Posoc10g00560, gene.Posoc10g00580, gene.Posoc10g00590, gene.Posoc10g00620, gene.Posoc10g12530
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_5_RagTag.1418, evm.TU.Scaffold_5_RagTag.1419 ...
evm.TU.Scaffold_5_RagTag.1422, evm.TU.Scaffold_5_RagTag.1426
Rhizophoraceae Carallia pectinifolia 7 nbisL1-mrna-11017, nbisL1-mrna-11075, nbisL1-mrna-11933 ...
nbisL1-mrna-20870, nbisL1-mrna-20871, nbisL1-mrna-20872, nbisL1-mrna-21965
Rhizophoraceae Ceriops tagal 11 nbisL1-mrna-8027, nbisL1-mrna-8448, nbisL1-mrna-8449 ...
nbisL1-mrna-8450, nbisL1-mrna-8451, nbisL1-mrna-8452, nbisL1-mrna-8453, nbisL1-mrna-8732, nbisL1-mrna-8733, nbisL1-mrna-9662, nbisL1-mrna-9852
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-11045, nbisL1-mrna-11047, nbisL1-mrna-21281 ...
nbisL1-mrna-21282, nbisL1-mrna-21644, nbisL1-mrna-7242
Rhizophoraceae Kandelia candel 1 add.evm.TU.utg000006l.339
Rhizophoraceae Kandelia obovata 4 Maker00009228, Maker00009401, Maker00009531, Maker00013601
Rhizophoraceae Rhizophora apiculata 20 nbisL1-mrna-10353, nbisL1-mrna-17210, nbisL1-mrna-17212 ...
nbisL1-mrna-17213, nbisL1-mrna-17214, nbisL1-mrna-17424, nbisL1-mrna-17425, nbisL1-mrna-17427, nbisL1-mrna-17428, nbisL1-mrna-17429, nbisL1-mrna-17430, nbisL1-mrna-17431, nbisL1-mrna-17432, nbisL1-mrna-17433, nbisL1-mrna-17435, nbisL1-mrna-19460, nbisL1-mrna-20366, nbisL1-mrna-20834, nbisL1-mrna-20835, nbisL1-mrna-20836
Rhizophoraceae Rhizophora mangle 12 nbisL1-mrna-12586, nbisL1-mrna-12587, nbisL1-mrna-15393 ...
nbisL1-mrna-15395, nbisL1-mrna-15396, nbisL1-mrna-15397, nbisL1-mrna-15398, nbisL1-mrna-23894, nbisL1-mrna-4777, nbisL1-mrna-4778, nbisL1-mrna-4779, nbisL1-mrna-4780
Salicaceae Populus euphratica 19 populus_peu00442, populus_peu10167, populus_peu16926 ...
populus_peu16927, populus_peu17508, populus_peu18281, populus_peu18635, populus_peu18637, populus_peu18638, populus_peu18639, populus_peu18640, populus_peu18641, populus_peu18642, populus_peu18643, populus_peu18667, populus_peu18668, populus_peu18669, populus_peu18670, populus_peu18671
Solanaceae Lycium barbarum 13 gene-LOC132617015, gene-LOC132617031, gene-LOC132617065 ...
gene-LOC132617109, gene-LOC132617127, gene-LOC132617217, gene-LOC132617652, gene-LOC132618067, gene-LOC132618404, gene-LOC132618462, gene-LOC132618607, gene-LOC132618843, gene-LOC132618862
Solanaceae Solanum chilense 9 SOLCI005067400, SOLCI005561500, SOLCI007299300 ...
SOLCI007299400, SOLCI007299500, SOLCI007299600, SOLCI007299700, SOLCI007299800, SOLCI007300000
Solanaceae Solanum pennellii 5 gene-LOC107024556, gene-LOC107024557, gene-LOC107024559 ...
gene-LOC107025392, gene-LOC107025393
Tamaricaceae Reaumuria soongarica 17 STRG.20653_chr08_+, gene_11332, gene_11333, gene_11334 ...
gene_11335, gene_11336, gene_11337, gene_11338, gene_11339, gene_11340, gene_11341, gene_11342, gene_11343, gene_17602, gene_7671, gene_7672, gene_7673
Tamaricaceae Tamarix chinensis 2 TC06G0293, TC06G0295
Zosteraceae Zostera marina 5 Zosma03g32300.v3.1, Zosma05g20600.v3.1, Zosma05g27190.v3.1 ...
Zosma06g06390.v3.1, Zosma06g27260.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.