Basic Information
Locus ID:
Chr28G007620
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 23902665 | 23910414 | + | Chr28G007620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 44 | 373 | 1.9E-59 | IPR000490 |
| Pfam | PF07983 | X8 domain | 391 | 462 | 8.5E-21 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 44 | 373 | 6.84E-76 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 43 | 378 | 6.3E-98 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 386 | 494 | 1.4E-12 | - |
| SMART | SM00768 | X8_cls | 390 | 475 | 2.5E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 285 | 298 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_025804304.1 | glucan endo-1,3-beta-glucosidase 1-like [Panicum hallii] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A2T7EWJ8 | X8 domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G374600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology