Basic Information
Locus ID:
Chr28G003530
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 5609517 | 5613038 | - | Chr28G003530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 14 | 50 | 3.2E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 127 | 306 | 2.67E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 59 | 4.97E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 66 | 5.8E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 88 | 360 | 1.6E-6 | IPR032675 |
| SMART | SM00256 | fbox_2 | 17 | 57 | 0.0052 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 56 | 10.557245 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42720.1 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_025804600.1 | MEIOTIC F-BOX protein MOF-like isoform X1 [Panicum hallii] | 0 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 0 | |
| TrEMBL | A0A811NK33 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS18090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology