Basic Information
Locus ID:
Chr28G001910
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 2472540 | 2478003 | + | Chr28G001910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 13 | 173 | 3.4E-46 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 176 | 2.92E-70 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 5.5E-77 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | 42.339298 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 3.4E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 3.4E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 3.4E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 3.4E-32 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 3.4E-32 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 582 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 349 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | NP_001334189.1 | Peptidyl-prolyl cis-trans isomerase CYP63-like [Zea mays] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VZF1 | PPIase cyclophilin-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15387 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology