Basic Information
Locus ID:
Chr28G000670
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000028 | 1057545 | 1061753 | + | Chr28G000670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 679 | 2.7E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 681 | 1.38E-37 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 91 | 240 | 1.36E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 474 | 9.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 257 | 1.1E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 475 | 708 | 1.9E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 686 | 18.760777 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 714 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 298 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004955423.1 | probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Setaria italica] | 0 |
| C0LGK4 | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811SNI3 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS67824 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology